HL_7MPI_096

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUAUUUUGUUGGUUUCUAG

Length

19 nucleotides

Bulged bases

7MPI|1|B5|U|840, 7MPI|1|B5|C|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|B5|C|827
7MPI|1|B5|U|828
7MPI|1|B5|A|829
7MPI|1|B5|U|830
7MPI|1|B5|U|831
7MPI|1|B5|U|832
7MPI|1|B5|U|833
7MPI|1|B5|G|834
7MPI|1|B5|U|835
7MPI|1|B5|U|836
7MPI|1|B5|G|837
7MPI|1|B5|G|838
7MPI|1|B5|U|839
7MPI|1|B5|U|840
7MPI|1|B5|U|841
7MPI|1|B5|C|842
7MPI|1|B5|U|843
7MPI|1|B5|A|844
7MPI|1|B5|G|845

Current chains

Chain B5

18S rRNA

Nearby chains

Chain BG

40S ribosomal protein S6-A

Chain BL

40S ribosomal protein S11-A