HL_7MPJ_034
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AUUUUAU
- Length
- 7 nucleotides
- Bulged bases
- 7MPJ|1|A1|U|1569
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MPJ_034 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3217
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7MPJ|1|A1|A|1566
7MPJ|1|A1|U|1567
7MPJ|1|A1|U|1568
7MPJ|1|A1|U|1569
7MPJ|1|A1|U|1570
7MPJ|1|A1|A|1571
7MPJ|1|A1|U|1572
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A4
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: