HL_7MPJ_084

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7MPJ|1|B5|U|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MPJ_084 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.301

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7MPJ|1|B5|C|276
7MPJ|1|B5|U|277
7MPJ|1|B5|U|278
7MPJ|1|B5|G|279

Current chains

Chain B5

18S rRNA

Nearby chains