HL_7MPJ_103
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 7MPJ|1|B5|A|1196
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MPJ_103 not in the Motif Atlas
- Homologous match to HL_8C3A_217
- Geometric discrepancy: 0.1055
- The information below is about HL_8C3A_217
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7MPJ|1|B5|G|1188
7MPJ|1|B5|A|1189
7MPJ|1|B5|C|1190
7MPJ|1|B5|B8N|1191
7MPJ|1|B5|C|1192
7MPJ|1|B5|A|1193
7MPJ|1|B5|A|1194
7MPJ|1|B5|C|1195
7MPJ|1|B5|A|1196
7MPJ|1|B5|C|1197
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BQ
- 40S ribosomal protein S16-A
- Chain BU
- 40S ribosomal protein S20
- Chain Bd
- 40S ribosomal protein S29-A
- Chain Bh
- Suppressor protein STM1
Coloring options: