HL_7MQ8_009

3D structure

PDB id

7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

7MQ8|1|L1|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ8|1|L1|G|377
7MQ8|1|L1|U|378
7MQ8|1|L1|C|379
7MQ8|1|L1|G|380
7MQ8|1|L1|C|381
7MQ8|1|L1|C|382
7MQ8|1|L1|G|383
7MQ8|1|L1|U|384
7MQ8|1|L1|G|385
7MQ8|1|L1|C|386
7MQ8|1|L1|C|387

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L8

40S ribosomal protein S8

Chain LD

40S ribosomal protein S11

Chain NN

Protein AATF

Chain NW

Nucleolar protein 10