HL_7MQ9_009

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

7MQ9|1|L1|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ9|1|L1|G|377
7MQ9|1|L1|U|378
7MQ9|1|L1|C|379
7MQ9|1|L1|G|380
7MQ9|1|L1|C|381
7MQ9|1|L1|C|382
7MQ9|1|L1|G|383
7MQ9|1|L1|U|384
7MQ9|1|L1|G|385
7MQ9|1|L1|C|386
7MQ9|1|L1|C|387

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L8

40S ribosomal protein S8

Chain LD

40S ribosomal protein S11

Chain NN

Protein AATF

Chain NW

Nucleolar protein 10