HL_7MQ9_011

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

7MQ9|1|L1|A|448, 7MQ9|1|L1|C|450

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ9|1|L1|C|441
7MQ9|1|L1|C|442
7MQ9|1|L1|U|443
7MQ9|1|L1|G|444
7MQ9|1|L1|A|445
7MQ9|1|L1|G|446
7MQ9|1|L1|A|447
7MQ9|1|L1|A|448
7MQ9|1|L1|A|449
7MQ9|1|L1|C|450
7MQ9|1|L1|G|451
7MQ9|1|L1|G|452

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4 X isoform

Chain L6

40S ribosomal protein S6

Chain L8

40S ribosomal protein S8

Chain NW

Nucleolar protein 10