HL_7MSC_003

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AGUGAUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSC_003 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.1774

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSC|1|A|A|137
7MSC|1|A|G|138
7MSC|1|A|U|139
7MSC|1|A|G|140
7MSC|1|A|A|141
7MSC|1|A|U|142
7MSC|1|A|G|143
7MSC|1|A|U|144

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23