HL_7MSC_056

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CUAAAAUGUAACG

Length

13 nucleotides

Bulged bases

7MSC|1|A|A|2506, 7MSC|1|A|C|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSC_056 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0881

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7MSC|1|A|C|2502
7MSC|1|A|U|2503
7MSC|1|A|A|2504
7MSC|1|A|A|2505
7MSC|1|A|A|2506
7MSC|1|A|A|2507
7MSC|1|A|U|2508
7MSC|1|A|G|2509
7MSC|1|A|U|2510
7MSC|1|A|A|2511
7MSC|1|A|A|2512
7MSC|1|A|C|2513
7MSC|1|A|G|2514

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27