3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
AGUCCAUAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7MSC_062 not in the Motif Atlas
Homologous match to HL_4WF9_056
Geometric discrepancy: 0.1114
The information below is about HL_4WF9_056
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32735.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7MSC|1|A|A|2709
7MSC|1|A|G|2710
7MSC|1|A|U|2711
7MSC|1|A|C|2712
7MSC|1|A|C|2713
7MSC|1|A|A|2714
7MSC|1|A|U|2715
7MSC|1|A|A|2716
7MSC|1|A|U|2717

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain M
50S ribosomal protein L16

Coloring options:


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