HL_7MSH_017

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UUUUCCUCUCCGGAGGAG

Length

18 nucleotides

Bulged bases

7MSH|1|A|G|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_017 not in the Motif Atlas

Geometric match to HL_5TBW_226

Geometric discrepancy: 0.3495

The information below is about HL_5TBW_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59342.2

Basepair signature

cWW-F-F-F-F-cWW-F-F

Number of instances in this motif group

5

Unit IDs

7MSH|1|A|U|633
7MSH|1|A|U|634
7MSH|1|A|U|635
7MSH|1|A|U|636
7MSH|1|A|C|637
7MSH|1|A|C|638
7MSH|1|A|U|639
7MSH|1|A|C|640
7MSH|1|A|U|641
7MSH|1|A|C|642
7MSH|1|A|C|643
7MSH|1|A|G|644
7MSH|1|A|G|645
7MSH|1|A|A|646
7MSH|1|A|G|647
7MSH|1|A|G|648
7MSH|1|A|A|649
7MSH|1|A|G|650

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L13