HL_7MSH_052

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUAAAGAUGC

Length

10 nucleotides

Bulged bases

7MSH|1|A|A|2268, 7MSH|1|A|A|2269, 7MSH|1|A|G|2270

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_052 not in the Motif Atlas

Homologous match to HL_7RQB_050

Geometric discrepancy: 0.1585

The information below is about HL_7RQB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.6

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

7MSH|1|A|G|2265
7MSH|1|A|U|2266
7MSH|1|A|A|2267
7MSH|1|A|A|2268
7MSH|1|A|A|2269
7MSH|1|A|G|2270
7MSH|1|A|A|2271
7MSH|1|A|U|2272
7MSH|1|A|G|2273
7MSH|1|A|C|2274

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain 7

50S ribosomal protein L37

Chain D

50S ribosomal protein L3

Chain R

50S ribosomal protein L21