HL_7MSH_054

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUGAAUCG

Length

8 nucleotides

Bulged bases

7MSH|1|A|U|2451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_054 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.2493

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7MSH|1|A|C|2446
7MSH|1|A|U|2447
7MSH|1|A|G|2448
7MSH|1|A|A|2449
7MSH|1|A|A|2450
7MSH|1|A|U|2451
7MSH|1|A|C|2452
7MSH|1|A|G|2453

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L28