HL_7MSH_056

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUAAAAUGUAACG

Length

13 nucleotides

Bulged bases

7MSH|1|A|A|2506, 7MSH|1|A|C|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_056 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0923

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7MSH|1|A|C|2502
7MSH|1|A|U|2503
7MSH|1|A|A|2504
7MSH|1|A|A|2505
7MSH|1|A|A|2506
7MSH|1|A|A|2507
7MSH|1|A|U|2508
7MSH|1|A|G|2509
7MSH|1|A|U|2510
7MSH|1|A|A|2511
7MSH|1|A|A|2512
7MSH|1|A|C|2513
7MSH|1|A|G|2514

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27