HL_7MSH_079

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGUGACGGC

Length

9 nucleotides

Bulged bases

7MSH|1|a|G|265

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_079 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.1406

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSH|1|a|G|258
7MSH|1|a|G|259
7MSH|1|a|U|260
7MSH|1|a|G|261
7MSH|1|a|A|262
7MSH|1|a|C|263
7MSH|1|a|G|264
7MSH|1|a|G|265
7MSH|1|a|C|266

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20