HL_7MSH_119

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGGAAACU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_119 not in the Motif Atlas

Homologous match to HL_6CZR_215

Geometric discrepancy: 0.2446

The information below is about HL_6CZR_215

Detailed Annotation

GNRA with extra near cWW

Broad Annotation

GNRA with extra near cWW

Motif group

HL_82182.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

7MSH|1|a|G|153
7MSH|1|a|G|154
7MSH|1|a|G|155
7MSH|1|a|A|156
7MSH|1|a|A|157
7MSH|1|a|A|158
7MSH|1|a|C|159
7MSH|1|a|U|160

Current chains

Chain a

16S rRNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain t

30S ribosomal protein S20