HL_7MSM_003

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

AGUGAUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_003 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.1804

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

7MSM|1|A|A|137
7MSM|1|A|G|138
7MSM|1|A|U|139
7MSM|1|A|G|140
7MSM|1|A|A|141
7MSM|1|A|U|142
7MSM|1|A|G|143
7MSM|1|A|U|144

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23