HL_7MSM_008

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CGGGUAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_008 not in the Motif Atlas

Geometric match to HL_6R47_001

Geometric discrepancy: 0.2697

The information below is about HL_6R47_001

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_93324.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

7MSM|1|A|C|292
7MSM|1|A|G|293
7MSM|1|A|G|294
7MSM|1|A|G|295
7MSM|1|A|U|296
7MSM|1|A|A|297
7MSM|1|A|G|298
7MSM|1|A|G|299

Current chains

Chain A

23S rRNA

Nearby chains