HL_7MSM_030

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GGUUGGCUUAGAAGCAGCCACCC

Length

23 nucleotides

Bulged bases

7MSM|1|A|A|1196, 7MSM|1|A|A|1206, 7MSM|1|A|C|1207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_030 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.2245

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7MSM|1|A|G|1187
7MSM|1|A|G|1188
7MSM|1|A|U|1189
7MSM|1|A|U|1190
7MSM|1|A|G|1191
7MSM|1|A|G|1192
7MSM|1|A|C|1193
7MSM|1|A|U|1194
7MSM|1|A|U|1195
7MSM|1|A|A|1196
7MSM|1|A|G|1197
7MSM|1|A|A|1198
7MSM|1|A|A|1199
7MSM|1|A|G|1200
7MSM|1|A|C|1201
7MSM|1|A|A|1202
7MSM|1|A|G|1203
7MSM|1|A|C|1204
7MSM|1|A|C|1205
7MSM|1|A|A|1206
7MSM|1|A|C|1207
7MSM|1|A|C|1208
7MSM|1|A|C|1209

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16