HL_7MSM_037

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7MSM|1|A|U|1527, 7MSM|1|A|U|1528

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_037 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1203

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSM|1|A|G|1520
7MSM|1|A|U|1521
7MSM|1|A|U|1522
7MSM|1|A|G|1523
7MSM|1|A|A|1524
7MSM|1|A|U|1525
7MSM|1|A|A|1526
7MSM|1|A|U|1527
7MSM|1|A|U|1528
7MSM|1|A|C|1529

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23