HL_7MSM_043

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7MSM|1|A|A|1849, 7MSM|1|A|A|1851, 7MSM|1|A|A|1853

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_043 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.0973

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7MSM|1|A|C|1847
7MSM|1|A|G|1848
7MSM|1|A|A|1849
7MSM|1|A|C|1850
7MSM|1|A|A|1851
7MSM|1|A|C|1852
7MSM|1|A|A|1853
7MSM|1|A|G|1854

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain S

50S ribosomal protein L22