Loop HL_7MSM

3D structure

PDB id: 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description: Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å

Loop

Sequence: GGAGACUGUGAAACCUCGACGCCAGUUGGGGCGGAGUCGUUGUUGAAAUAC
Length: 51 nucleotides
Bulged bases: 7MSM|1|A|G|2378, 7MSM|1|A|C|2382, 7MSM|1|A|C|2383, 7MSM|1|A|U|2387, 7MSM|1|A|G|2394
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7MSM|1|A|G|2361
7MSM|1|A|G|2362
7MSM|1|A|A|2363
7MSM|1|A|G|2364
7MSM|1|A|A|2365
7MSM|1|A|C|2366
7MSM|1|A|U|2367
7MSM|1|A|G|2368
7MSM|1|A|U|2369
7MSM|1|A|G|2370
7MSM|1|A|A|2371
7MSM|1|A|A|2372
7MSM|1|A|A|2373
7MSM|1|A|C|2374
7MSM|1|A|C|2375
7MSM|1|A|U|2376
7MSM|1|A|C|2377
7MSM|1|A|G|2378
7MSM|1|A|A|2379
7MSM|1|A|C|2380
7MSM|1|A|G|2381
7MSM|1|A|C|2382
7MSM|1|A|C|2383
7MSM|1|A|A|2384
7MSM|1|A|G|2385
7MSM|1|A|U|2386
7MSM|1|A|U|2387
7MSM|1|A|G|2388
7MSM|1|A|G|2389
7MSM|1|A|G|2390
7MSM|1|A|G|2391
7MSM|1|A|C|2392
7MSM|1|A|G|2393
7MSM|1|A|G|2394
7MSM|1|A|A|2395
7MSM|1|A|G|2396
7MSM|1|A|U|2397
7MSM|1|A|C|2398
7MSM|1|A|G|2399
7MSM|1|A|U|2400
7MSM|1|A|U|2401
7MSM|1|A|G|2402
7MSM|1|A|U|2403
7MSM|1|A|U|2404
7MSM|1|A|G|2405
7MSM|1|A|A|2406
7MSM|1|A|A|2407
7MSM|1|A|A|2408
7MSM|1|A|U|2409
7MSM|1|A|A|2410
7MSM|1|A|C|2411

Current chains

Chain A: 23S rRNA

Nearby chains

Chain 8: 50S ribosomal protein L1
Chain x: Energy-dependent translational throttle protein EttA

HL_7MSM_054