HL_7MSM_100

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GGUCAAC

Length

7 nucleotides

Bulged bases

7MSM|1|a|C|1160

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSM_100 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3142

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

7MSM|1|a|G|1157
7MSM|1|a|G|1158
7MSM|1|a|U|1159
7MSM|1|a|C|1160
7MSM|1|a|A|1161
7MSM|1|a|A|1162
7MSM|1|a|C|1163

Current chains

Chain a

16S rRNA

Nearby chains