HL_7MSZ_010

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGGGAUG

Length

8 nucleotides

Bulged bases

7MSZ|1|A|U|394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSZ_010 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1118

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.4

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

7MSZ|1|A|C|388
7MSZ|1|A|U|389
7MSZ|1|A|G|390
7MSZ|1|A|G|391
7MSZ|1|A|G|392
7MSZ|1|A|A|393
7MSZ|1|A|U|394
7MSZ|1|A|G|395

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24