HL_7MSZ_079

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGACGGC

Length

9 nucleotides

Bulged bases

7MSZ|1|a|G|265

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSZ_079 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.1429

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSZ|1|a|G|258
7MSZ|1|a|G|259
7MSZ|1|a|U|260
7MSZ|1|a|G|261
7MSZ|1|a|A|262
7MSZ|1|a|C|263
7MSZ|1|a|G|264
7MSZ|1|a|G|265
7MSZ|1|a|C|266

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20