HL_7MSZ_117

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACGGCAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSZ_117 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.1537

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7MSZ|1|A|G|2542
7MSZ|1|A|A|2543
7MSZ|1|A|C|2544
7MSZ|1|A|G|2545
7MSZ|1|A|G|2546
7MSZ|1|A|C|2547
7MSZ|1|A|A|2548
7MSZ|1|A|A|2549
7MSZ|1|A|U|2550

Current chains

Chain A

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5