HL_7MT2_080

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GGUGACGGC

Length

9 nucleotides

Bulged bases

7MT2|1|a|G|265

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MT2_080 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1275

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7MT2|1|a|G|258
7MT2|1|a|G|259
7MT2|1|a|U|260
7MT2|1|a|G|261
7MT2|1|a|A|262
7MT2|1|a|C|263
7MT2|1|a|G|264
7MT2|1|a|G|265
7MT2|1|a|C|266

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20