HL_7MT3_079

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGUGACGGC

Length

9 nucleotides

Bulged bases

7MT3|1|a|G|265

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MT3_079 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.1265

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7MT3|1|a|G|258
7MT3|1|a|G|259
7MT3|1|a|U|260
7MT3|1|a|G|261
7MT3|1|a|A|262
7MT3|1|a|C|263
7MT3|1|a|G|264
7MT3|1|a|G|265
7MT3|1|a|C|266

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20