HL_7MT7_035

3D structure

PDB id

7MT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P and E site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

GCCAGUC

Length

7 nucleotides

Bulged bases

7MT7|1|A|C|1456, 7MT7|1|A|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MT7_035 not in the Motif Atlas

Homologous match to HL_7A0S_033

Geometric discrepancy: 0.1442

The information below is about HL_7A0S_033

Detailed Annotation

Pseudoknot geometry with 3' bulge

Broad Annotation

No text annotation

Motif group

HL_49081.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

17

Unit IDs

7MT7|1|A|G|1455
7MT7|1|A|C|1456
7MT7|1|A|C|1457
7MT7|1|A|A|1458
7MT7|1|A|G|1459
7MT7|1|A|U|1460
7MT7|1|A|C|1461

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22