3D structure

PDB id
7MT7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P and E site tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
2.71 Å

Loop

Sequence
GAU(2MG)(5MC)AACGC
Length
10 nucleotides
Bulged bases
7MT7|1|a|A|961, 7MT7|1|a|G|964
QA status
Modified nucleotides: 2MG, 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7MT7_095 not in the Motif Atlas
Homologous match to HL_4LFB_021
Geometric discrepancy: 0.1216
The information below is about HL_4LFB_021
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50779.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7MT7|1|a|G|956
7MT7|1|a|A|957
7MT7|1|a|U|958
7MT7|1|a|2MG|959
7MT7|1|a|5MC|960
7MT7|1|a|A|961
7MT7|1|a|A|962
7MT7|1|a|C|963
7MT7|1|a|G|964
7MT7|1|a|C|965

Current chains

Chain a
16S rRNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain m
30S ribosomal protein S13
Chain n
30S ribosomal protein S14 type Z
Chain y
Transfer RNA; tRNA

Coloring options:


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