HL_7N1P_006

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

7N1P|1|16|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_006 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.0536

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7N1P|1|16|G|259
7N1P|1|16|G|260
7N1P|1|16|U|261
7N1P|1|16|A|262
7N1P|1|16|A|263
7N1P|1|16|C|264
7N1P|1|16|G|265
7N1P|1|16|G|266
7N1P|1|16|C|267

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SQ

30S ribosomal protein S17

Chain ST

30S ribosomal protein S20