HL_7N1P_007

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_007 not in the Motif Atlas

Homologous match to HL_5J7L_007

Geometric discrepancy: 0.0488

The information below is about HL_5J7L_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

7N1P|1|16|U|296
7N1P|1|16|G|297
7N1P|1|16|A|298
7N1P|1|16|G|299
7N1P|1|16|A|300
7N1P|1|16|G|301

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SD

30S ribosomal protein S4

Chain SE

30S ribosomal protein S5

Chain SL

30S ribosomal protein S12

Chain SQ

30S ribosomal protein S17