HL_7N1P_008

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0663

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7N1P|1|16|A|320
7N1P|1|16|A|321
7N1P|1|16|C|322
7N1P|1|16|U|323
7N1P|1|16|G|324
7N1P|1|16|A|325
7N1P|1|16|G|326
7N1P|1|16|A|327
7N1P|1|16|C|328
7N1P|1|16|A|329
7N1P|1|16|C|330
7N1P|1|16|G|331
7N1P|1|16|G|332
7N1P|1|16|U|333

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SP

30S ribosomal protein S16

Chain ST

30S ribosomal protein S20