HL_7N1P_018

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7N1P|1|16|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_018 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3048

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7N1P|1|16|C|840
7N1P|1|16|C|841
7N1P|1|16|U|842
7N1P|1|16|U|843
7N1P|1|16|G|844
7N1P|1|16|A|845
7N1P|1|16|G|846

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SR

30S ribosomal protein S18