HL_7N1P_043

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

7N1P|1|23|G|329, 7N1P|1|23|A|330, 7N1P|1|23|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_043 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.0632

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

7N1P|1|23|G|327
7N1P|1|23|U|328
7N1P|1|23|G|329
7N1P|1|23|A|330
7N1P|1|23|C|331
7N1P|1|23|A|332
7N1P|1|23|G|333
7N1P|1|23|C|334
7N1P|1|23|C|335

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4

Chain LX

50S ribosomal protein L24