HL_7N1P_086

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7N1P|1|23|A|2268, 7N1P|1|23|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_086 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0515

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7N1P|1|23|C|2264
7N1P|1|23|U|2265
7N1P|1|23|A|2266
7N1P|1|23|A|2267
7N1P|1|23|A|2268
7N1P|1|23|G|2269
7N1P|1|23|A|2270
7N1P|1|23|G|2271
7N1P|1|23|U|2272
7N1P|1|23|A|2273
7N1P|1|23|A|2274
7N1P|1|23|C|2275
7N1P|1|23|G|2276

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LP

50S ribosomal protein L16

Chain La

50S ribosomal protein L27