HL_7N1P_088
3D structure
- PDB id
- 7N1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UGCAAUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N1P_088 not in the Motif Atlas
- Homologous match to HL_5J7L_189
- Geometric discrepancy: 0.0626
- The information below is about HL_5J7L_189
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
7N1P|1|23|U|2324
7N1P|1|23|G|2325
7N1P|1|23|C|2326
7N1P|1|23|A|2327
7N1P|1|23|A|2328
7N1P|1|23|U|2329
7N1P|1|23|G|2330
7N1P|1|23|G|2331
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain Dt
- Transfer RNA; tRNA
- Chain LE
- 50S ribosomal protein L5
- Chain LP
- 50S ribosomal protein L16
- Chain La
- 50S ribosomal protein L27
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