3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
AGUUCAUAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N1P_092 not in the Motif Atlas
Homologous match to HL_4WF9_056
Geometric discrepancy: 0.1547
The information below is about HL_4WF9_056
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32735.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7N1P|1|23|A|2471
7N1P|1|23|G|2472
7N1P|1|23|U|2473
7N1P|1|23|U|2474
7N1P|1|23|C|2475
7N1P|1|23|A|2476
7N1P|1|23|U|2477
7N1P|1|23|A|2478
7N1P|1|23|U|2479

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LF
50S ribosomal protein L6
Chain LP
50S ribosomal protein L16
Chain Lj
50S ribosomal protein L36
Chain Pt
Transfer RNA; tRNA

Coloring options:


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