3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
UGAAGUAG
Length
8 nucleotides
Bulged bases
7N1P|1|23|G|2529
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N1P_093 not in the Motif Atlas
Homologous match to HL_5J7L_194
Geometric discrepancy: 0.0698
The information below is about HL_5J7L_194
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_31585.4
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
20

Unit IDs

7N1P|1|23|U|2528
7N1P|1|23|G|2529
7N1P|1|23|A|2530
7N1P|1|23|A|2531
7N1P|1|23|G|2532
7N1P|1|23|U|2533
7N1P|1|23|A|2534
7N1P|1|23|G|2535

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LF
50S ribosomal protein L6
Chain Lj
50S ribosomal protein L36

Coloring options:


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