HL_7N1P_098

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7N1P|1|23|G|2751, 7N1P|1|23|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_098 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0464

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7N1P|1|23|C|2745
7N1P|1|23|U|2746
7N1P|1|23|G|2747
7N1P|1|23|A|2748
7N1P|1|23|A|2749
7N1P|1|23|A|2750
7N1P|1|23|G|2751
7N1P|1|23|C|2752
7N1P|1|23|A|2753
7N1P|1|23|U|2754
7N1P|1|23|C|2755
7N1P|1|23|U|2756
7N1P|1|23|A|2757
7N1P|1|23|A|2758
7N1P|1|23|G|2759

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LF

50S ribosomal protein L6

Chain LM

50S ribosomal protein L13

Chain Lj

50S ribosomal protein L36