HL_7N1P_112

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

7N1P|1|23|U|958, 7N1P|1|23|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_112 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.1056

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

7N1P|1|23|PSU|955
7N1P|1|23|G|956
7N1P|1|23|C|957
7N1P|1|23|U|958
7N1P|1|23|A|959
7N1P|1|23|A|960
7N1P|1|23|C|961
7N1P|1|23|G|962

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain LP

50S ribosomal protein L16