HL_7N2C_019

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_019 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0862

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7N2C|1|16|C|862
7N2C|1|16|U|863
7N2C|1|16|A|864
7N2C|1|16|A|865
7N2C|1|16|C|866
7N2C|1|16|G|867

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SE

30S ribosomal protein S5