HL_7N2C_027

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

7N2C|1|16|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_027 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.4435

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7N2C|1|16|U|1165
7N2C|1|16|G|1166
7N2C|1|16|A|1167
7N2C|1|16|U|1168
7N2C|1|16|A|1169
7N2C|1|16|A|1170
7N2C|1|16|A|1171

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SG

30S ribosomal protein S7

Chain SU

30S ribosomal protein S21