3D structure

PDB id
7N2C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
7N2C|1|23|A|196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N2C_038 not in the Motif Atlas
Homologous match to HL_4WF9_006
Geometric discrepancy: 0.0886
The information below is about HL_4WF9_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7N2C|1|23|G|194
7N2C|1|23|A|195
7N2C|1|23|A|196
7N2C|1|23|A|197
7N2C|1|23|C|198
7N2C|1|23|A|199
7N2C|1|23|U|200
7N2C|1|23|C|201

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Dt
Transfer RNA; tRNA
Chain LO
50S ribosomal protein L15
Chain Lb
50S ribosomal protein L28

Coloring options:


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