HL_7N2C_057

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UCAUCCCGA

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_057 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2841

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7N2C|1|23|U|884
7N2C|1|23|C|885
7N2C|1|23|A|886
7N2C|1|23|U|887
7N2C|1|23|C|888
7N2C|1|23|C|889
7N2C|1|23|C|890
7N2C|1|23|G|891
7N2C|1|23|A|892

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LE

50S ribosomal protein L5

Chain SS

30S ribosomal protein S19