HL_7N2C_092

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_092 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.1398

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7N2C|1|23|A|2471
7N2C|1|23|G|2472
7N2C|1|23|U|2473
7N2C|1|23|U|2474
7N2C|1|23|C|2475
7N2C|1|23|A|2476
7N2C|1|23|U|2477
7N2C|1|23|A|2478
7N2C|1|23|U|2479

Current chains

Chain 23

23S rRNA

Nearby chains

Chain EF

Elongation factor G

Chain LF

50S ribosomal protein L6

Chain Lj

50S ribosomal protein L36