HL_7N2C_115

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2C_115 not in the Motif Atlas

Homologous match to HL_9DFE_198

Geometric discrepancy: 0.1444

The information below is about HL_9DFE_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7N2C|1|23|G|2304
7N2C|1|23|U|2305
7N2C|1|23|C|2306
7N2C|1|23|G|2307
7N2C|1|23|G|2308
7N2C|1|23|A|2309
7N2C|1|23|C|2310
7N2C|1|23|A|2311
7N2C|1|23|U|2312

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LE

50S ribosomal protein L5