HL_7N2U_008

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2U_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0704

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7N2U|1|16|A|320
7N2U|1|16|A|321
7N2U|1|16|C|322
7N2U|1|16|U|323
7N2U|1|16|G|324
7N2U|1|16|A|325
7N2U|1|16|G|326
7N2U|1|16|A|327
7N2U|1|16|C|328
7N2U|1|16|A|329
7N2U|1|16|C|330
7N2U|1|16|G|331
7N2U|1|16|G|332
7N2U|1|16|U|333

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SP

30S ribosomal protein S16

Chain ST

30S ribosomal protein S20