HL_7N2U_018

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7N2U|1|16|U|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2U_018 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.2065

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7N2U|1|16|C|840
7N2U|1|16|C|841
7N2U|1|16|U|842
7N2U|1|16|U|843
7N2U|1|16|G|844
7N2U|1|16|A|845
7N2U|1|16|G|846

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SR

30S ribosomal protein S18