HL_7N2U_035

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7N2U|1|23|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2U_035 not in the Motif Atlas

Homologous match to HL_5J7L_136

Geometric discrepancy: 0.0595

The information below is about HL_5J7L_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7N2U|1|23|G|123
7N2U|1|23|G|124
7N2U|1|23|A|125
7N2U|1|23|A|126
7N2U|1|23|A|127
7N2U|1|23|C|128

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LW

50S ribosomal protein L23

Chain Lh

50S ribosomal protein L34